The detailed information of tRNA gene sequence


Sequence ID>C172000145
Genome IDCP018812
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia sp. SOS3 [CP018811, CP018812]
Start position on genome 1068024
End posion on genome 1068118
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggttgtcaac
tRNA gene sequence 
GGAAGGCATACGCATCGGGTGGTGCGGCCGGGCTTCAAACCCGGTAGGGGGTGTCAGACA
CTCTCTGGCAGGTTCGACTCCTGCTGCCTTCCGCCg
Downstream region at tRNA end position 
tttgacgaac
Secondary structure (Cloverleaf model)
>C172000145	SeC	TCA
                   c      GCCg tttgacgaac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      G C T        A      | | | | |     G
    G       A C G C       G C A G G     C
    G       | | | |                 T T
    T       T G C G
      G G          G     TAGGGGGTGTCAGACACTCTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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