The detailed information of tRNA gene sequence


Sequence ID>C172000160
Genome IDCP019510
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesJanthinobacterium sp. LM6 [CP019510]
Start position on genome 4481003
End posion on genome 4480913
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
caggcaccgc
tRNA gene sequence 
gGAAAGCACACTCATCCGGTGATGTGGCCGGGCTTCAAACCCGGTGGAGGGCGTCAGACG
TTCTCCCGTAGGTTCGACTCCTACTGTTTTCCgcca
Downstream region at tRNA end position 
gttattcttc
Secondary structure (Cloverleaf model)
>C172000160	SeC	TCA
                   c      gcca gttattcttc
                     g - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     C - G
                     A - T          T C
                    C     C A T C C     A
      C C T        A      | | | | |     G
    G       A C T C       G T A G G     C
    G       | |   |                 T T
    T       T G T G
      G A          G     TGGAGGGCGTCAGACGTTCTCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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