The detailed information of tRNA gene sequence


Sequence ID>C172000176
Genome IDCP020121
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesComamonas kerstersii 8943 [CP020121]
Start position on genome 2762184
End posion on genome 2762089
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctcttcttt
tRNA gene sequence 
GGAAGGCAATCGTGCCCGGTGGTGCGGCCAGGCTTCAAACTTGGTGGAGGGTGTTAGCCA
CTCTCGGGTTGGTTCGACTCCAGCTGCTTTCCGCCA
Downstream region at tRNA end position 
aattcaaaag
Secondary structure (Cloverleaf model)
>C172000176	SeC	TCA
                   t      GCCA aattcaaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G - C
                     C - G
                     A - T          T C
                    A     C G A C C     A
      C C C        T      | + | | |     G
    G       G T G C       G T T G G     C
    G       + + | |                 T T
    T       T G C G
      G G          G     TGGAGGGTGTTAGCCACTCTCGG
                    C - G
                    C - G
                    A - T
                    G + T
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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