The detailed information of tRNA gene sequence


Sequence ID>C172000202
Genome IDLT671418
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerminiimonas arsenitoxidans AS8 [LT671418]
Start position on genome 587711
End posion on genome 587806
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atgttagtac
tRNA gene sequence 
GGAAGGAAATCGTCCCTGGTGGGGCGGCTGGGCTTCAAACCCAGTTGGTGGCGCCATGCG
TCGCTGGGTGGGTTCGACTCCCGCTTCCTTCCGCCA
Downstream region at tRNA end position 
ttatttgcca
Secondary structure (Cloverleaf model)
>C172000202	SeC	TCA
                   c      GCCA ttatttgcca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    A     C G C C C     A
      T C C        T      | + | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     TTGGTGGCGCCATGCGTCGCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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