The detailed information of tRNA gene sequence


Sequence ID>C172000206
Genome IDLT859958
Search identical group
Phylum/ClassChloroflexota
SpeciesBrevefilum fermentans [LT859958]
Start position on genome 2160222
End posion on genome 2160315
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccttagctgt
tRNA gene sequence 
GGGAGTGGTTAGGTCCCGGTGGGCCTCCCGGTCTTCAAAATCGGTGTCGGGTCGCTTGGC
GAGCCGTGGTGGGTTCGACTCCCATCCATTCCCGtct
Downstream region at tRNA end position 
tgtaaagagg
Secondary structure (Cloverleaf model)
>C172000206	SeC	TCA
                   t      Gtct tgtaaagagg
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G G          C     TGTCGGGTCGCTTGGCGAGCCGTG
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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