The detailed information of tRNA gene sequence


Sequence ID>W131181113
Genome IDARNQ01000039
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPannonibacter phragmitetus DSM 14782 [ARNQ]
Start position on genome 16183
End posion on genome 16109
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cgaagatttc
tRNA gene sequence 
GGGCGTGTAGCTCAGCGGGAGAGCACTACGTTGACATCGTAGGGGTCACAGGTTCAATCC
CTGTCACGCCCACCA
Downstream region at tRNA end position 
ttattgcagc
Secondary structure (Cloverleaf model)
>W131181113	Val	GAC
                   c      ACCA ttattgcagc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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