The detailed information of tRNA gene sequence


Sequence ID>W131222510
Genome IDAUBI01000003
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAcetobacter nitrogenifigens DSM 23921 [AUBI]
Start position on genome 47958
End posion on genome 48031
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggccgcctgc
tRNA gene sequence 
GCGCCCGTAGCTCAATTGGTTAGAGCGGGCCGCTCATAACGGCTTGGTTGCGGGTTCAAG
TCCTGCCGGGCGCAggc
Downstream region at tRNA end position 
gcatgtccga
Secondary structure (Cloverleaf model)
>W131222510	Met	CAT
                   c      Aggc gcatgtccga
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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