The detailed information of tRNA gene sequence


Sequence ID>W131228706
Genome IDAUGE01000001
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCitrifermentans bremense R1 [AUGE]
Start position on genome 240359
End posion on genome 240456
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aggcaaacga
tRNA gene sequence 
GGAAGCACCACCGTCGCTGGTGGGCGGCCCGGTCTTCAAAACCGGTGTGGGGGGTGAGAA
ACTTCCCAGGTGGGTTCGATTCCCATGTGCTTCCGCCA
Downstream region at tRNA end position 
attaccgttt
Secondary structure (Cloverleaf model)
>W131228706	SeC(p)	TCA
                   a      GCCA attaccgttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    C     T A C C C     A
      C G C        A      + | | | |     G
    T       T G C C       G T G G G     C
    G       + | | |                 T T
    G       G C G G
      T G G        C     TGTGGGGGGTGAGAAACTTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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