The detailed information of tRNA gene sequence


Sequence ID>W131158329
Genome IDAQTY01000001
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. SCGC AAA288-L16 SCGC AAA288-L16 [AQTY]
Start position on genome 48658
End posion on genome 48734
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcgtgataa
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTTAGAGCATACGGTTCATATCCGTAGTGTCCGGGGTTCAAG
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
agtaagtaag
Secondary structure (Cloverleaf model)
>W131158329	Met	CAT
                   a      ACCA agtaagtaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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