The detailed information of tRNA gene sequence


Sequence ID>W131228707
Genome IDAUGE01000001
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCitrifermentans bremense R1 [AUGE]
Start position on genome 504171
End posion on genome 504095
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctgtacatgc
tRNA gene sequence 
GGGGTTGTAGCTCAGTTGGTTAGAGTGCCAGCCTGTCACGCTGGAAGTCGCGGGTTCGAG
CCCCGTCAACCCCGCCA
Downstream region at tRNA end position 
tacatattca
Secondary structure (Cloverleaf model)
>W131228707	Asp	GTC
                   c      GCCA tacatattca
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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