The detailed information of tRNA gene sequence


Sequence ID>W131215106
Genome IDATUS01000006
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSpongiibacter tropicus DSM 19543 [ATUS]
Start position on genome 8857
End posion on genome 8932
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtaaagatgt
tRNA gene sequence 
GCTGGCGTAGCTCAGTTGGTAGAGCAGCTGACTTGTAATCAGCCGGTCGGGGGTTCGACT
CCTCTCGCCAGCTCCA
Downstream region at tRNA end position 
ctcttttcat
Secondary structure (Cloverleaf model)
>W131215106	Thr	TGT
                   t      TCCA ctcttttcat
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T C T C C     A
      T G A        A      + | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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