The detailed information of tRNA gene sequence


Sequence ID>W131167779
Genome IDARDN01000015
Search identical group
Phylum/ClassBacteroidota
SpeciesEchinicola pacifica DSM 19836 [ARDN]
Start position on genome 65301
End posion on genome 65375
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caaaaaaaat
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAG
TCCCGTCCATTCCGCat
Downstream region at tRNA end position 
aaagccttac
Secondary structure (Cloverleaf model)
>W131167779	Asp	GTC
                   t      GCat aaagccttac
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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