The detailed information of tRNA gene sequence


Sequence ID>W131167511
Genome IDARDI01000003
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus oshimai DSM 12092 [ARDI]
Start position on genome 327825
End posion on genome 327732
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gatggcactt
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCTGAAGGGACACGACTGGAAATCGTGTAGGCGGGCTTAAACC
TGCCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aagccccccg
Secondary structure (Cloverleaf model)
>W131167511	Ser	GGA
                   t      GCCA aagccccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     TAGGCGGGCTTAAACCTGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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