The detailed information of tRNA gene sequence


Sequence ID>W131222137
Genome IDAUBA01000011
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNovosphingobium acidiphilum DSM 19966 [AUBA]
Start position on genome 81894
End posion on genome 81969
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtcctgcgt
tRNA gene sequence 
GGGCCTGTAGCTCAGCGGTTAGAGCTGGCCGCTCATAACGGCTAGGTCGCGGGTTCAAAT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tcgccacgca
Secondary structure (Cloverleaf model)
>W131222137	Met	CAT
                   t      ACCA tcgccacgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     A
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTC
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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