The detailed information of tRNA gene sequence


Sequence ID>W131087040
Genome IDAOCD01000006
Search identical group
Phylum/ClassBacillota
SpeciesStreptococcus ratti FA-1 = DSM 20564 [AOCD]
Start position on genome 9541
End posion on genome 9627
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgctctttac
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCGAGTGCGCACGCTTGGAAAGCGTGTAGTCCTTAACGGGGC
TCGGGGGTTCGAATCCCTTCCTCTCCTttt
Downstream region at tRNA end position 
atccccttga
Secondary structure (Cloverleaf model)
>W131087040	Ser	GGA
                   c      Tttt atccccttga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        C      + + | | |     G
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    C       G T G C
      C G A        G     TAGTCCTTAACGGGGCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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