The detailed information of tRNA gene sequence


Sequence ID>W131237109
Genome IDAUMV01000011
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus ficus DSM 19119 [AUMV]
Start position on genome 105650
End posion on genome 105734
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aatccagtgt
tRNA gene sequence 
GCCGAGGTGGCGGAATTGGTAGACGCACTAGTTTCAGGGACTAGCGCCGCGAGGTGTGTG
GGTTCAAATCCCATCCTCGGCACCA
Downstream region at tRNA end position 
caaagacccc
Secondary structure (Cloverleaf model)
>W131237109	Leu	CAG
                   t      ACCA caaagacccc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T A A        G      + | | | |     A
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCGAGGTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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