The detailed information of tRNA gene sequence


Sequence ID>W131237088
Genome IDAUMV01000004
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus ficus DSM 19119 [AUMV]
Start position on genome 159024
End posion on genome 158948
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accagagtaa
tRNA gene sequence 
CGCAGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGTCCCTGCAACCA
Downstream region at tRNA end position 
aagtccccca
Secondary structure (Cloverleaf model)
>W131237088	Met	CAT
                   a      ACCA aagtccccca
                     C   A
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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