The detailed information of tRNA gene sequence


Sequence ID>W131231281
Genome IDAUII01000025
Search identical group
Phylum/ClassActinomycetota
SpeciesPseudonocardia asaccharolytica DSM 44247 [AUII]
Start position on genome 43874
End posion on genome 43787
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcgtcggc
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTAGGGCGCACGCTTGGAAAGCGTGTTGGGGGCAACCCCTC
GCGGGTTCGAATCCCGCATCCTCCGCCA
Downstream region at tRNA end position 
ccgcgaccgg
Secondary structure (Cloverleaf model)
>W131231281	Ser	GGA
                   c      GCCA ccgcgaccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T C C G       G C G G G     C
    G       + | | |                 T T
    C       G G G C
      C T A        G     TTGGGGGCAACCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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