The detailed information of tRNA gene sequence


Sequence ID>W131221877
Genome IDAUAV01000007
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesGlaciecola pallidula DSM 14239 = ACAM 615 [AUAV]
Start position on genome 100277
End posion on genome 100201
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcaaaatgt
tRNA gene sequence 
GGCCCCTTAGCTCAGTTGGTTAGAGCATACGACTCATAATCGTCAGGTCCCCTGTTCGAG
TCAGGGAGGGGCCACCA
Downstream region at tRNA end position 
ctttttatca
Secondary structure (Cloverleaf model)
>W131221877	Met	CAT
                   t      ACCA ctttttatca
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G G G A C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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