The detailed information of tRNA gene sequence


Sequence ID>W131107489
Genome IDAPFQ01000047
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. EC-0012 [APFQ]
Start position on genome 222925
End posion on genome 223015
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccccataac
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAAGCACCGGTCTTGAAAACCGGCGATGGTTAATAGCTA
TCCTAGGGTTCAAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
cattagaaaa
Secondary structure (Cloverleaf model)
>W131107489	Ser	TGA
                   c      GCCA cattagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       T A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CGATGGTTAATAGCTATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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