The detailed information of tRNA gene sequence


Sequence ID>W131107734
Genome IDAPFT01000054
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. EDC-020 [APFT]
Start position on genome 114584
End posion on genome 114668
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
aacaaaattt
tRNA gene sequence 
GCGGAAGTGGCGAAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCGCGAGGCGTAAG
AGTTCAAGTCTCTTCTTCCGCACCA
Downstream region at tRNA end position 
tatttgatga
Secondary structure (Cloverleaf model)
>W131107734	Leu	TAG
                   t      ACCA tatttgatga
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T T C T C     A
      T A A        G      | | | | |     A
    T       A G C G       A A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCGAGGCGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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