The detailed information of tRNA gene sequence


Sequence ID>W131108958
Genome IDAPGP01000072
Search identical group
Phylum/ClassBacillota
SpeciesCaldicellulosiruptor sp. F32 [APGP]
Start position on genome 10215
End posion on genome 10123
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaaagaggc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCACGACTGGAAATCGTGTGTACCCCCAAAAGGG
GTACCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>W131108958	Ser	GGA
                   c      GCCA tttttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTACCCCCAAAAGGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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