The detailed information of tRNA gene sequence


Sequence ID>W131167764
Genome IDARDN01000004
Search identical group
Phylum/ClassBacteroidota
SpeciesEchinicola pacifica DSM 19836 [ARDN]
Start position on genome 2545
End posion on genome 2469
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatgatattt
tRNA gene sequence 
GGCGAGGTAGCTCAGTTGGTTAGAGCGCAGGATTCATAACCCTGAGGTCACGGGTTCAAC
TCCCGTCCTCGCTACTA
Downstream region at tRNA end position 
ttaaaccttc
Secondary structure (Cloverleaf model)
>W131167764	Met	CAT
                   t      ACTA ttaaaccttc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     T G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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