The detailed information of tRNA gene sequence


Sequence ID>W131223196
Genome IDAUBX01000009
Search identical group
Phylum/ClassBacteroidota
SpeciesAlgoriphagus vanfongensis DSM 17529 [AUBX]
Start position on genome 540162
End posion on genome 540238
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaatatat
tRNA gene sequence 
GGCGAGGTAGCTCAGTTGGTTAGAGCGCAGGATTCATAACCCTGAGGTCACGGGTTCAAC
TCCCGTCCTCGCTACAA
Downstream region at tRNA end position 
aggctttcgg
Secondary structure (Cloverleaf model)
>W131223196	Met	CAT
                   t      ACAA aggctttcgg
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     T G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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