The detailed information of tRNA gene sequence


Sequence ID>W131230118
Genome IDAUHI01000023
Search identical group
Phylum/ClassBacillota
SpeciesHalalkalibacillus halophilus DSM 18494 [AUHI]
Start position on genome 8544
End posion on genome 8468
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtcttcacac
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGCCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
atatttatca
Secondary structure (Cloverleaf model)
>W131230118	Met	CAT
                   c      ACCA atatttatca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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