The detailed information of tRNA gene sequence


Sequence ID>W131230828
Genome IDAUHY01000049
Search identical group
Phylum/ClassDeinococcota
SpeciesMeiothermus rufus DSM 22234 [AUHY]
Start position on genome 15618
End posion on genome 15694
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cattgccctt
tRNA gene sequence 
GGGCGCGTAGCTCAGATGGCTAGAGCACTACCTTGACACGGTAGGGGTCGTTGGTTCGAG
TCCAATCGCGCCCACCA
Downstream region at tRNA end position 
cgtccagacg
Secondary structure (Cloverleaf model)
>W131230828	Val	GAC
                   t      ACCA cgtccagacg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T A A C C     A
      A G A        A      + | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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