The detailed information of tRNA gene sequence


Sequence ID>W131237764
Genome IDAUQW01000065
Search identical group
Phylum/ClassDeinococcota
SpeciesCalidithermus chliarophilus DSM 9957 [AUQW]
Start position on genome 16034
End posion on genome 16110
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgaaattct
tRNA gene sequence 
GGCCCGGTGGTGTAGTTGGTTAACATACCCGCCTGTCACGTGGGAGATCGCGGGTTCAAG
TCCCGTCCGGGCCGCCA
Downstream region at tRNA end position 
aaaacgcgtg
Secondary structure (Cloverleaf model)
>W131237764	Asp	GTC
                   t      GCCA aaaacgcgtg
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     A
    T       T G T G       G C G G G     C
    G       | | | +                 T T
    G       A C A T
      T T A        A     AGATC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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