The detailed information of tRNA gene sequence


Sequence ID>W131250001
Genome IDCAUF01000145
Search identical group
Phylum/ClassActinomycetota
SpeciesTropheryma whipplei str. Art1 [CAUF]
Start position on genome 5437
End posion on genome 5522
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgggtgcaat
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCGCGCTTGGAAAGCGCGTTGGGTGCAAGCCCTC
AGGGGTTCGAATCCCCTATCCTCCGCag
Downstream region at tRNA end position 
aacacgctcg
Secondary structure (Cloverleaf model)
>W131250001	Ser	GGA
                   t      GCag aacacgctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTGCAAGCCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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