The detailed information of tRNA gene sequence


Sequence ID>W131213697
Genome IDATTF01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HIMB058 [ATTF]
Start position on genome 26769
End posion on genome 26684
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cctagttata
tRNA gene sequence 
GGAGGGGTTCCAGAGCGGTCAAATGGGGCGGGCTGTAAACCCGTTGACTTCGGTCTTCGA
AAGTTCGAATCTTTCCCCCTCCACCA
Downstream region at tRNA end position 
aacttgaagc
Secondary structure (Cloverleaf model)
>W131213697	Tyr	GTA
                   a      ACCA aacttgaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T T C     A
      C G A        T      | | | | |     G
    G       G A C C       G A A A G     C
    G         | | |                 T T
    T       A T G G
      C A A        G     TGACTTCGGTCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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