The detailed information of tRNA gene sequence


Sequence ID>W131186225
Genome IDARVY01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HTCC1040 [ARVY]
Start position on genome 696139
End posion on genome 696215
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caactaaagt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGATCGCCTGTCACGCGATAGGTCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
ctttttccct
Secondary structure (Cloverleaf model)
>W131186225	Asp	GTC
                   t      GCCA ctttttccct
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK