The detailed information of tRNA gene sequence


Sequence ID>W131213693
Genome IDATTF01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HIMB058 [ATTF]
Start position on genome 10471
End posion on genome 10395
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttgccattag
tRNA gene sequence 
GCGCCCTTAGCTCAGCTGGATAGAGCATCGGTTTTCTAAACCGAGGGTCGTAGGTTCGAA
TCCTTCAGGGCGCGCCA
Downstream region at tRNA end position 
ctacttaaaa
Secondary structure (Cloverleaf model)
>W131213693	Arg	TCT
                   g      GCCA ctacttaaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C T T C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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