The detailed information of tRNA gene sequence


Sequence ID>W131156078
Genome IDAQPD01000040
Search identical group
Phylum/ClassAlphaproteobacteria
Speciesalpha proteobacterium SCGC AAA027-C06 [AQPD]
Start position on genome 1718
End posion on genome 1642
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttcaacaaaa
tRNA gene sequence 
GGGCCGGTAGCTCAGTTGGTTAGAGCACACCCTTGATAAGGGTGGGGTCGAAAGTTCGAG
TCTTTCTCGGCCCACCA
Downstream region at tRNA end position 
tttttattag
Secondary structure (Cloverleaf model)
>W131156078	Ile	GAT
                   a      ACCA tttttattag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T G
                    T     C T T T C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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