The detailed information of tRNA gene sequence


Sequence ID>W131223965
Genome IDAUCL01000001
Search identical group
Phylum/ClassActinomycetota
SpeciesBifidobacterium tsurumiense DSM 17777 [AUCL]
Start position on genome 85519
End posion on genome 85432
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagtaacgtc
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGAAAGGGGCACCCTGCTAAGGTGTTAGTCGTGTATGCGGC
TCGAGGGTTCGAATCCCTCTGACTCCGCgg
Downstream region at tRNA end position 
atgggttcgt
Secondary structure (Cloverleaf model)
>W131223965	Ser	GCT
                   c      GCgg atgggttcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        G     TAGTCGTGTATGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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