The detailed information of tRNA gene sequence


Sequence ID>C000009
Genome IDAE000657
Search identical group
Phylum/ClassAquificota
SpeciesAquifex aeolicus VF5 [AE000657]
Start position on genome 972005
End posion on genome 972094
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gttttagtaa
tRNA gene sequence 
GACGGGGTGGCCGAGCGGACGAAGGCGGGGGACTCGAAATCCCTTGGCGGGTTACCAGCC
CGCCCGTGGGTTCGAATCCCACCCCCGTCGctt
Downstream region at tRNA end position 
attccaaaaa
Secondary structure (Cloverleaf model)
>C000009	Ser	CGA
                   a      Gctt attccaaaaa
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGGCGGGTTACCAGCCCGCCC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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