The detailed information of tRNA gene sequence


Sequence ID>C000028
Genome IDAE000657
Search identical group
Phylum/ClassAquificota
SpeciesAquifex aeolicus VF5 [AE000657]
Start position on genome 1231312
End posion on genome 1231220
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatattagaa
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATTTGAAATCCCTTGGCGGGTTACAGGCC
CGCCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gtgtgcttta
Secondary structure (Cloverleaf model)
>C000028	Ser	TGA
                   a      GCCA gtgtgcttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGGCGGGTTACAGGCCCGCCC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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