The detailed information of tRNA gene sequence


Sequence ID>C000042
Genome IDAE000657
Search identical group
Phylum/ClassAquificota
SpeciesAquifex aeolicus VF5 [AE000657]
Start position on genome 383386
End posion on genome 383315
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aatatactca
tRNA gene sequence 
GCCGGCGTAGCTCAGCGGTAGAGCGCGGGCTTCGTAAGCCTGAGGTCGTGGGTTCGAATC
CCACCGCCGGCTctc
Downstream region at tRNA end position 
aaacaccatg
Secondary structure (Cloverleaf model)
>C000042	Thr	CGT
                   a      Tctc aaacaccatg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     G
      C     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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