The detailed information of tRNA gene sequence


Sequence ID>C000495
Genome IDCP000697
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAcidiphilium cryptum JF-5 [CP000697]
Start position on genome 2523927
End posion on genome 2524019
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaccctcggc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCCGAAGGCGGCGGTTTGCTAAACCGTTAGACGATGTAGAGTC
GTCTCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
cccatttcct
Secondary structure (Cloverleaf model)
>C000495	Ser	GCT
                   c      GCCA cccatttcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TAGACGATGTAGAGTCGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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