The detailed information of tRNA gene sequence


Sequence ID>C000781
Genome IDCP000724
Search identical group
Phylum/ClassBacillota
SpeciesAlkaliphilus metalliredigens QYMF [CP000724]
Start position on genome 39483
End posion on genome 39570
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caacaaacac
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCTAAGGGGCACGCCTGGAAAGCGTGTAAGGCTGAAAGGCCCC
GCGGGTTCGAGTCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ttaaaaagtt
Secondary structure (Cloverleaf model)
>C000781	Ser	GGA
                   c      GCCA ttaaaaagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G G G     C
    G         | |                   T T
    C       A G G G
      T A          G     TAAGGCTGAAAGGCCCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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