The detailed information of tRNA gene sequence


Sequence ID>C000808
Genome IDCP000724
Search identical group
Phylum/ClassBacillota
SpeciesAlkaliphilus metalliredigens QYMF [CP000724]
Start position on genome 2399957
End posion on genome 2400049
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatatcatat
tRNA gene sequence 
GGGGGTAGATGGGTTCTGGTGTGCCCTCTGGTCTTCAAAACCAGCGCGAGGGGTTAGTAG
CCTCTTGGGTGGGTTCGATTCCCACGTACTCCCgcca
Downstream region at tRNA end position 
aacatttaaa
Secondary structure (Cloverleaf model)
>C000808	SeC	TCA
                   t      gcca aacatttaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G   G          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          T     CGCGAGGGGTTAGTAGCCTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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