The detailed information of tRNA gene sequence


Sequence ID>C000835
Genome IDCP000724
Search identical group
Phylum/ClassBacillota
SpeciesAlkaliphilus metalliredigens QYMF [CP000724]
Start position on genome 4445799
End posion on genome 4445708
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacaaaatat
tRNA gene sequence 
GGAGAAGTACTCAAGTAGGCTCAAGAGGACGGTTTGCTAAACCGTTAGGTCGTGTATGCG
GCGCGCGGGTTCGAATCCCGCCTTCTCCGCCA
Downstream region at tRNA end position 
tttttttaac
Secondary structure (Cloverleaf model)
>C000835	Ser	GCT
                   t      GCCA tttttttaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C G C C C     A
    A T G A        A      | | | | |     G
  G         A C T C       G C G G G     C
  G           | | |                 T T
  C         A G A G
    T C A          G     TAGGTCGTGTATGCGGCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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