The detailed information of tRNA gene sequence


Sequence ID>C000900
Genome IDCP000235
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAnaplasma phagocytophilum str. HZ [CP000235]
Start position on genome 1079546
End posion on genome 1079619
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agcgctttac
tRNA gene sequence 
GGGGCCGTAGCTCAGTAGGATAGAGCATTAGATTCCTAATCTGAGGGTCGTGCGTTCGAA
TCGCACCGGTCCCAcac
Downstream region at tRNA end position 
atcctcgagg
Secondary structure (Cloverleaf model)
>C000900	Arg	CCT
                   c      Acac atcctcgagg
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        A      | | | | |     G
    A       C T C G       G T G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    T + G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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