The detailed information of tRNA gene sequence


Sequence ID>C000907
Genome IDCP000235
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAnaplasma phagocytophilum str. HZ [CP000235]
Start position on genome 1252920
End posion on genome 1252836
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccaacccgg
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGCACGCCTGGAAAGTGTGTACACAGCAATGTGTC
GGGGGTTCGAATCCCCCTCTTTCCGtat
Downstream region at tRNA end position 
tttgggatgt
Secondary structure (Cloverleaf model)
>C000907	Ser	GGA
                   g      Gtat tttgggatgt
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TACACAGCAATGTGTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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