The detailed information of tRNA gene sequence


Sequence ID>C001248
Genome IDCP000061
Search identical group
Phylum/ClassMycoplasmatota
SpeciesAster yellows witches'-broom phytoplasma AYWB [CP000061]
Start position on genome 117809
End posion on genome 117885
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttcaattaa
tRNA gene sequence 
CGGGAAGTGGCTTAGCTTGGTATAGCGCCTGGTTTGGGACCAGGAGGTCGCGGGTTCAAA
TCCTGCCTTCCCGACCA
Downstream region at tRNA end position 
ttccttaatt
Secondary structure (Cloverleaf model)
>C001248	Pro	TGG
                   a      ACCA ttccttaatt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | + | |     A
    T       T T C G       G C G G G     C
    T         | | |                 T T
    G       T A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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