The detailed information of tRNA gene sequence


Sequence ID>C001256
Genome IDCP000061
Search identical group
Phylum/ClassMycoplasmatota
SpeciesAster yellows witches'-broom phytoplasma AYWB [CP000061]
Start position on genome 277103
End posion on genome 277179
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaaatgat
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGCTAGAGTGTACGGTTCATACCCGTGAGGTCGAGGGTTCGAA
TCCCTCTGCCGCTACCA
Downstream region at tRNA end position 
tggacctgta
Secondary structure (Cloverleaf model)
>C001256	Met	CAT
                   t      ACCA tggacctgta
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G + T          T A
                    T     C T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      C T A        G     AGGTC
                    T + G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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