The detailed information of tRNA gene sequence


Sequence ID>C001258
Genome IDCP000061
Search identical group
Phylum/ClassMycoplasmatota
SpeciesAster yellows witches'-broom phytoplasma AYWB [CP000061]
Start position on genome 277264
End posion on genome 277354
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accatttttt
tRNA gene sequence 
GGAGGAATACCCAAGTCCGGTTGAAGGGGTCAGTCTTGAAAACTGAGAGGTCCGAAAGGA
CGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
tcaattaaat
Secondary structure (Cloverleaf model)
>C001258	Ser	TGA
                   t      GCCA tcaattaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    T T G A        G     GAGGTCCGAAAGGACGC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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