The detailed information of tRNA gene sequence


Sequence ID>C001262
Genome IDCP000061
Search identical group
Phylum/ClassMycoplasmatota
SpeciesAster yellows witches'-broom phytoplasma AYWB [CP000061]
Start position on genome 579492
End posion on genome 579404
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttggattttt
tRNA gene sequence 
GGAGGAATACTCAAGTGGACGAAGAGGCACGCTTGGAAAGCGTGTAGATCTAAAAAGATG
CGAGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
aataaaatta
Secondary structure (Cloverleaf model)
>C001262	Ser	GGA
                   t      GCCA aataaaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    A       A G A G
      C G A        G     TAGATCTAAAAAGATGC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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