The detailed information of tRNA gene sequence


Sequence ID>C001273
Genome IDCP000061
Search identical group
Phylum/ClassMycoplasmatota
SpeciesAster yellows witches'-broom phytoplasma AYWB [CP000061]
Start position on genome 466038
End posion on genome 465962
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttgtatgttt
tRNA gene sequence 
GTTTGAGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTCGAA
TCCCTTCTCAAACGCCA
Downstream region at tRNA end position 
gtttttatct
Secondary structure (Cloverleaf model)
>C001273	Arg	TCT
                   t      GCCA gtttttatct
                     G - C
                     T - A
                     T - A
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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