The detailed information of tRNA gene sequence


Sequence ID>W131110627
Genome IDAPKF01000180
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 51559
End posion on genome 51483
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttacaatcaa
tRNA gene sequence 
GCGCCCGTAGCTCAACAGGACAGAGCAACGGACTTCTAATCCGTAGGTTGTGGGTTCGAT
TCCCGCCGGGCGCGCCA
Downstream region at tRNA end position 
ggagtttgcg
Secondary structure (Cloverleaf model)
>W131110627	Arg	TCT
                   a      GCCA ggagtttgcg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C G C C C     A
      C A A        A      | + | | |     G
    A       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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