The detailed information of tRNA gene sequence


Sequence ID>W131157314
Genome IDAQRZ01000027
Search identical group
Phylum/ClassSynergistota
SpeciesSynergistetes bacterium JGI 0000079-D21 [AQRZ]
Start position on genome 11705
End posion on genome 11629
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgtgctcgc
tRNA gene sequence 
AGGTCCGTAGCTCGAATTGGTAGAGCACCGGACTCCAAATCCGGGGGTTGCAGGTTCGAA
TCCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
ttctttataa
Secondary structure (Cloverleaf model)
>W131157314	Trp	CCA
                   c      GCCA ttctttataa
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A A G        A      | | | | |     G
    T       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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