The detailed information of tRNA gene sequence


Sequence ID>W131225145
Genome IDAUDI01000008
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPseudoduganella violaceinigra DSM 15887 [AUDI]
Start position on genome 320273
End posion on genome 320198
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cggcctcttt
tRNA gene sequence 
TCCCTGGTAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAGT
CCAGGTCGGGGAGCCA
Downstream region at tRNA end position 
gaataaagaa
Secondary structure (Cloverleaf model)
>W131225145	Asn	GTT
                   t      GCCA gaataaagaa
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G + T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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